Index

A

align_to_genes() (in module scpdac.pp)

available_models() (in module scpdac.models)

B

basic_plot() (in module scpdac.pl)

bin_data() (in module scpdac.pp)

D

derive_malignant_mask() (in module scpdac.tl)

E

embed_and_predict() (in module scpdac.tl)

extend_atlas() (in module scpdac.tl)

F

forward() (scpdac.tl.MLP method)

from_species() (scpdac.tl.HierarchicalClassifier class method)

G

get_genes() (in module scpdac.pp)

H

HierarchicalClassifier (class in scpdac.tl)

L

list_models() (in module scpdac.models)

load_classifier_checkpoints() (in module scpdac.models) load_scanvi_model() (in module scpdac.models)

M

MLP (class in scpdac.tl) module scpdac.models scpdac.pl scpdac.pp scpdac.tl

P

plot_label_distribution() (in module scpdac.pl)

predict() (scpdac.tl.HierarchicalClassifier method) predict_labels() (in module scpdac.tl)

S

scpdac.models module scpdac.pl module

scpdac.pp module scpdac.tl module slice_and_bin() (in module scpdac.pp)